Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC015656.1-201ENST00000624209 3578 ntBASIC12.43□□□□□ -0.42
CD40P25942 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 AC011498.7-201ENST00000624986 2027 ntBASIC12.43□□□□□ -0.42
CD40P25942 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 RN7SL832P-201ENST00000607781 1756 ntBASIC12.43□□□□□ -0.42
CD40P25942 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.43□□□□□ -0.42
CD40P25942 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
CD40P25942 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
CD40P25942 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CD40P25942 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
CD40P25942 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 KRT17P5-201ENST00000332088 839 ntBASIC12.42□□□□□ -0.42
CD40P25942 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.42□□□□□ -0.42
CD40P25942 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 RPS9P1-201ENST00000419943 583 ntBASIC12.42□□□□□ -0.42
CD40P25942 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.42□□□□□ -0.42
CD40P25942 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 DUTP3-201ENST00000450025 415 ntBASIC12.42□□□□□ -0.42
CD40P25942 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 TMEM198B-204ENST00000484016 896 ntBASIC12.42□□□□□ -0.42
CD40P25942 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 AC114947.1-202ENST00000514136 344 ntBASIC12.42□□□□□ -0.42
CD40P25942 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 KRT8P1-201ENST00000557533 1207 ntBASIC12.42□□□□□ -0.42
CD40P25942 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 RN7SL190P-201ENST00000582519 257 ntBASIC12.42□□□□□ -0.42
CD40P25942 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CD40P25942 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CD40P25942 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.42□□□□□ -0.42
CD40P25942 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CD40P25942 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.41□□□□□ -0.42
CD40P25942 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CD40P25942 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms