Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CD58P19256 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.52■□□□□ 0.08
CD58P19256 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.52■□□□□ 0.08
CD58P19256 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
CD58P19256 AC106794.1-201ENST00000506935 792 ntBASIC15.52■□□□□ 0.08
CD58P19256 AC005740.2-201ENST00000511085 419 ntBASIC15.52■□□□□ 0.08
CD58P19256 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.52■□□□□ 0.08
CD58P19256 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.52■□□□□ 0.08
CD58P19256 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.52■□□□□ 0.08
CD58P19256 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.52■□□□□ 0.08
CD58P19256 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 RN7SL163P-201ENST00000583100 276 ntBASIC15.52■□□□□ 0.08
CD58P19256 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CD58P19256 AL451050.2-201ENST00000606967 682 ntBASIC15.52■□□□□ 0.08
CD58P19256 AC090164.2-201ENST00000611487 516 ntBASIC15.52■□□□□ 0.08
CD58P19256 MIR6869-201ENST00000619434 62 ntBASIC15.52■□□□□ 0.08
CD58P19256 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.52■□□□□ 0.07
CD58P19256 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.52■□□□□ 0.07
CD58P19256 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CD58P19256 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.52■□□□□ 0.07
CD58P19256 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CD58P19256 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.52■□□□□ 0.07
CD58P19256 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.52■□□□□ 0.07
CD58P19256 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CD58P19256 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CD58P19256 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
CD58P19256 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 FAM90A7P-201ENST00000382628 1395 ntBASIC15.51■□□□□ 0.07
CD58P19256 FAM90A23P-201ENST00000400136 1395 ntBASIC15.51■□□□□ 0.07
CD58P19256 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
CD58P19256 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 NKAIN1P1-201ENST00000435754 582 ntBASIC15.51■□□□□ 0.07
CD58P19256 HLA-J-204ENST00000495278 958 ntBASIC15.51■□□□□ 0.07
CD58P19256 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.51■□□□□ 0.07
CD58P19256 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.51■□□□□ 0.07
CD58P19256 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.51■□□□□ 0.07
CD58P19256 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.51■□□□□ 0.07
CD58P19256 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.51■□□□□ 0.07
CD58P19256 AC068587.8-201ENST00000641239 219 ntBASIC15.51■□□□□ 0.07
CD58P19256 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.51■□□□□ 0.07
CD58P19256 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CD58P19256 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.51■□□□□ 0.07
CD58P19256 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.51■□□□□ 0.07
CD58P19256 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CD58P19256 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CD58P19256 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CD58P19256 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD58P19256 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.5■□□□□ 0.07
CD58P19256 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD58P19256 AC016397.2-201ENST00000624848 1985 ntBASIC15.5■□□□□ 0.07
CD58P19256 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD58P19256 DPM3-202ENST00000368399 517 ntBASIC15.5■□□□□ 0.07
CD58P19256 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms