Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN1P18031 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 AC005840.4-201ENST00000541242 2494 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 AC020910.6-201ENST00000623084 1459 ntBASIC15.25■□□□□ 0.03
PTPN1P18031 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.25■□□□□ 0.03
PTPN1P18031 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.25■□□□□ 0.03
PTPN1P18031 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PTPN1P18031 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN1P18031 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.25■□□□□ 0.03
PTPN1P18031 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
PTPN1P18031 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTPN1P18031 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PTPN1P18031 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
PTPN1P18031 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 GRK6P1-201ENST00000400595 1711 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN1P18031 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 UPF3AP2-201ENST00000457924 1132 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 RN7SL769P-201ENST00000469386 295 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 AC242376.1-201ENST00000559033 726 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 FGFR3P5-201ENST00000564496 886 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 AC026803.1-201ENST00000569130 274 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.24■□□□□ 0.03
PTPN1P18031 MIR4754-201ENST00000582477 89 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 AL109837.1-201ENST00000603272 613 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 LINC01783-202ENST00000614408 828 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 BX284668.2-205ENST00000619677 828 ntBASIC15.24■□□□□ 0.03
PTPN1P18031 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.24■□□□□ 0.03
PTPN1P18031 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PTPN1P18031 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTPN1P18031 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
PTPN1P18031 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC15.24■□□□□ 0.03
PTPN1P18031 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
PTPN1P18031 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN1P18031 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
PTPN1P18031 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 AC097376.2-205ENST00000610159 5334 ntBASIC15.23■□□□□ 0.03
PTPN1P18031 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN1P18031 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PTPN1P18031 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN1P18031 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN1P18031 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN1P18031 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.23■□□□□ 0.03
PTPN1P18031 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.23■□□□□ 0.03
PTPN1P18031 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PTPN1P18031 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.23■□□□□ 0.03
PTPN1P18031 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
PTPN1P18031 BANF1P3-201ENST00000412556 261 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms