Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 AP003171.2-201ENST00000528208 925 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.07□□□□□ -0.32
PPP3CBP16298 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AC138649.2-201ENST00000615886 705 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AC113367.3-201ENST00000508316 1912 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 AL157414.3-201ENST00000624276 1954 ntBASIC13.07□□□□□ -0.32
PPP3CBP16298 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.07□□□□□ -0.32
PPP3CBP16298 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
PPP3CBP16298 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PPP3CBP16298 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AC100850.1-201ENST00000506768 649 ntBASIC13.06□□□□□ -0.32
PPP3CBP16298 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AC004466.1-201ENST00000599515 1080 ntBASIC13.06□□□□□ -0.32
PPP3CBP16298 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.06□□□□□ -0.32
PPP3CBP16298 AL136301.1-201ENST00000615830 422 ntBASIC13.06□□□□□ -0.32
PPP3CBP16298 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
PPP3CBP16298 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.06□□□□□ -0.32
PPP3CBP16298 LILRP1-201ENST00000444199 1370 ntBASIC13.06□□□□□ -0.32
PPP3CBP16298 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.06□□□□□ -0.32
PPP3CBP16298 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PPP3CBP16298 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.05□□□□□ -0.32
PPP3CBP16298 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PPP3CBP16298 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
PPP3CBP16298 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms