Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR3DP05423 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
POLR3DP05423 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR3DP05423 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR3DP05423 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR3DP05423 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.26■□□□□ 0.35
POLR3DP05423 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR3DP05423 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.26■□□□□ 0.35
POLR3DP05423 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.26■□□□□ 0.35
POLR3DP05423 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.26■□□□□ 0.35
POLR3DP05423 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.26■□□□□ 0.35
POLR3DP05423 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR3DP05423 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.26■□□□□ 0.35
POLR3DP05423 MIR3188-201ENST00000583494 85 ntBASIC17.26■□□□□ 0.35
POLR3DP05423 MIR6769A-201ENST00000617340 73 ntBASIC17.26■□□□□ 0.35
POLR3DP05423 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
POLR3DP05423 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
POLR3DP05423 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.26■□□□□ 0.35
POLR3DP05423 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
POLR3DP05423 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 AC015909.3-201ENST00000572855 1794 ntBASIC17.25■□□□□ 0.35
POLR3DP05423 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ELK2AP-201ENST00000392510 1007 ntBASIC17.25■□□□□ 0.35
POLR3DP05423 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.25■□□□□ 0.35
POLR3DP05423 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 AC234782.1-201ENST00000451950 919 ntBASIC17.25■□□□□ 0.35
POLR3DP05423 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.25■□□□□ 0.35
POLR3DP05423 IGLV3-15-201ENST00000518356 244 ntBASIC17.25■□□□□ 0.35
POLR3DP05423 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.25■□□□□ 0.35
POLR3DP05423 AC242376.1-201ENST00000559033 726 ntBASIC17.25■□□□□ 0.35
POLR3DP05423 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.25■□□□□ 0.35
POLR3DP05423 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
POLR3DP05423 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
POLR3DP05423 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
POLR3DP05423 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
POLR3DP05423 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.24■□□□□ 0.35
POLR3DP05423 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR3DP05423 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
POLR3DP05423 AGGF1P1-201ENST00000509500 2073 ntBASIC17.24■□□□□ 0.35
POLR3DP05423 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms