Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 AC114812.1-204ENST00000449669 728 ntBASIC12.29□□□□□ -0.44
CD3DP04234 AL589987.1-201ENST00000453380 819 ntBASIC12.29□□□□□ -0.44
CD3DP04234 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.29□□□□□ -0.44
CD3DP04234 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.29□□□□□ -0.44
CD3DP04234 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 SPDYE22P-201ENST00000582158 798 ntBASIC12.29□□□□□ -0.44
CD3DP04234 AC004466.1-201ENST00000599515 1080 ntBASIC12.29□□□□□ -0.44
CD3DP04234 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 AC004840.1-201ENST00000636359 365 ntBASIC12.29□□□□□ -0.44
CD3DP04234 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
CD3DP04234 AL590440.2-201ENST00000641973 1595 ntBASIC12.29□□□□□ -0.44
CD3DP04234 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
CD3DP04234 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD3DP04234 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD3DP04234 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.28□□□□□ -0.44
CD3DP04234 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 LRRC59-203ENST00000576448 1531 ntBASIC12.28□□□□□ -0.44
CD3DP04234 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
CD3DP04234 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 KLF2P2-201ENST00000416807 1039 ntBASIC12.28□□□□□ -0.44
CD3DP04234 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.28□□□□□ -0.44
CD3DP04234 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 FO681548.1-201ENST00000455617 1132 ntBASIC12.28□□□□□ -0.44
CD3DP04234 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 AC027369.6-201ENST00000525520 931 ntBASIC12.28□□□□□ -0.44
CD3DP04234 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.28□□□□□ -0.44
CD3DP04234 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.28□□□□□ -0.44
CD3DP04234 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.28□□□□□ -0.44
CD3DP04234 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 AC007431.3-201ENST00000623221 587 ntBASIC12.28□□□□□ -0.44
CD3DP04234 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 AC073869.1-201ENST00000415574 2762 ntBASIC12.28□□□□□ -0.44
CD3DP04234 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.28□□□□□ -0.44
CD3DP04234 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.28□□□□□ -0.44
CD3DP04234 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CD3DP04234 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
CD3DP04234 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD3DP04234 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CD3DP04234 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms