Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 AC103810.10-201ENST00000606504 343 ntBASIC15.22■□□□□ 0.03
LMNAP02545 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.22■□□□□ 0.03
LMNAP02545 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
LMNAP02545 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
LMNAP02545 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LMNAP02545 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 AC127383.1-201ENST00000444697 1800 ntBASIC15.22■□□□□ 0.03
LMNAP02545 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.22■□□□□ 0.03
LMNAP02545 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.22■□□□□ 0.03
LMNAP02545 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.22■□□□□ 0.03
LMNAP02545 DGCR9-201ENST00000609630 2415 ntBASIC15.22■□□□□ 0.03
LMNAP02545 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.22■□□□□ 0.03
LMNAP02545 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMNAP02545 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.21■□□□□ 0.03
LMNAP02545 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.21■□□□□ 0.03
LMNAP02545 AC104073.2-201ENST00000453737 312 ntBASIC15.21■□□□□ 0.03
LMNAP02545 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 TUBB8P8-201ENST00000458717 1058 ntBASIC15.21■□□□□ 0.03
LMNAP02545 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.21■□□□□ 0.03
LMNAP02545 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.21■□□□□ 0.03
LMNAP02545 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 AC090857.1-201ENST00000527400 390 ntBASIC15.21■□□□□ 0.03
LMNAP02545 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.21■□□□□ 0.03
LMNAP02545 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LMNAP02545 DNM1P30-201ENST00000563586 452 ntBASIC15.21■□□□□ 0.03
LMNAP02545 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.21■□□□□ 0.03
LMNAP02545 OR10B1P-201ENST00000601666 907 ntBASIC15.21■□□□□ 0.03
LMNAP02545 AC073413.1-201ENST00000603927 732 ntBASIC15.21■□□□□ 0.03
LMNAP02545 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
LMNAP02545 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMNAP02545 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.21■□□□□ 0.03
LMNAP02545 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LMNAP02545 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.21■□□□□ 0.02
LMNAP02545 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMNAP02545 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMNAP02545 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMNAP02545 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.21■□□□□ 0.02
LMNAP02545 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMNAP02545 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMNAP02545 AC152010.1-201ENST00000415779 2006 ntBASIC15.21■□□□□ 0.02
LMNAP02545 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LMNAP02545 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.21■□□□□ 0.02
LMNAP02545 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.2■□□□□ 0.02
LMNAP02545 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.2■□□□□ 0.02
LMNAP02545 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LMNAP02545 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LMNAP02545 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 AC027612.1-201ENST00000445234 2395 ntBASIC15.2■□□□□ 0.02
LMNAP02545 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LMNAP02545 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LMNAP02545 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LMNAP02545 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.2■□□□□ 0.02
LMNAP02545 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LMNAP02545 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LMNAP02545 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms