Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.27□□□□□ -0.12
PDGFBP01127 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PDGFBP01127 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
PDGFBP01127 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
PDGFBP01127 JPT2-203ENST00000382711 894 ntTSL 4 BASIC14.27□□□□□ -0.13
PDGFBP01127 HLA-DMA-202ENST00000395303 1007 ntBASIC14.27□□□□□ -0.13
PDGFBP01127 AC073210.1-201ENST00000414799 232 ntBASIC14.27□□□□□ -0.13
PDGFBP01127 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC14.27□□□□□ -0.13
PDGFBP01127 AC026412.1-206ENST00000502273 206 ntBASIC14.27□□□□□ -0.13
PDGFBP01127 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC14.27□□□□□ -0.13
PDGFBP01127 AC090820.1-201ENST00000519722 591 ntBASIC14.27□□□□□ -0.13
PDGFBP01127 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDGFBP01127 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC14.27□□□□□ -0.13
PDGFBP01127 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.27□□□□□ -0.13
PDGFBP01127 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
PDGFBP01127 ACTBP9-201ENST00000587663 1099 ntBASIC14.27□□□□□ -0.13
PDGFBP01127 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PDGFBP01127 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC14.27□□□□□ -0.13
PDGFBP01127 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
PDGFBP01127 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 FLJ16779-201ENST00000612722 7638 ntBASIC14.27□□□□□ -0.13
PDGFBP01127 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.27□□□□□ -0.13
PDGFBP01127 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PDGFBP01127 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.27□□□□□ -0.13
PDGFBP01127 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
PDGFBP01127 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PDGFBP01127 CCT8L1P-201ENST00000465400 1674 ntBASIC14.26□□□□□ -0.13
PDGFBP01127 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PDGFBP01127 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PDGFBP01127 LINC00554-201ENST00000564841 3011 ntBASIC14.26□□□□□ -0.13
PDGFBP01127 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFBP01127 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 CICP6-201ENST00000457191 2729 ntBASIC14.26□□□□□ -0.13
PDGFBP01127 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.26□□□□□ -0.13
PDGFBP01127 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 HDGF-202ENST00000368206 960 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFBP01127 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.26□□□□□ -0.13
PDGFBP01127 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PDGFBP01127 B9D1-206ENST00000461069 923 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 SLC25A15P3-201ENST00000505530 290 ntBASIC14.26□□□□□ -0.13
PDGFBP01127 LY6E-215ENST00000523847 427 ntTSL 3 BASIC14.26□□□□□ -0.13
PDGFBP01127 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
PDGFBP01127 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFBP01127 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
PDGFBP01127 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC14.26□□□□□ -0.13
PDGFBP01127 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 AL162727.3-201ENST00000635661 2787 ntBASIC14.26□□□□□ -0.13
PDGFBP01127 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.26□□□□□ -0.13
PDGFBP01127 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PDGFBP01127 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDGFBP01127 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.25□□□□□ -0.13
PDGFBP01127 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
PDGFBP01127 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.25□□□□□ -0.13
PDGFBP01127 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
PDGFBP01127 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC14.25□□□□□ -0.13
PDGFBP01127 AL008638.4-201ENST00000624792 1315 ntBASIC14.25□□□□□ -0.13
PDGFBP01127 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PDGFBP01127 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms