Protein–RNA interactions for Protein: O95407

TNFRSF6B, Tumor necrosis factor receptor superfamily member 6B, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF6BO95407 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 RN7SL618P-201ENST00000477850 296 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SDHAP3-202ENST00000515467 728 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 AC022145.2-201ENST00000598203 171 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 MIR6080-201ENST00000617359 66 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 FAM197Y3-203ENST00000618346 717 ntBASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
TNFRSF6BO95407 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 OR2I1P-208ENST00000641137 4948 ntBASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 AC026434.2-201ENST00000506094 1078 ntBASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 AC131206.1-201ENST00000538078 1211 ntBASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TIMM17BP1-201ENST00000545713 516 ntBASIC10.55□□□□□ -0.72
TNFRSF6BO95407 AL512361.1-201ENST00000554200 418 ntBASIC10.55□□□□□ -0.72
TNFRSF6BO95407 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 C20orf181-201ENST00000623918 480 ntBASIC10.55□□□□□ -0.72
TNFRSF6BO95407 LINC02486-201ENST00000604157 3000 ntBASIC10.55□□□□□ -0.72
TNFRSF6BO95407 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
TNFRSF6BO95407 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms