Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC15.54■□□□□ 0.08
CSPG5O95196 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.54■□□□□ 0.08
CSPG5O95196 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 AC090502.4-201ENST00000551714 1386 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
CSPG5O95196 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 KRT17P5-201ENST00000332088 839 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 RN7SKP109-201ENST00000410592 316 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.54■□□□□ 0.08
CSPG5O95196 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 TLE1P1-201ENST00000422965 589 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 XBP1P1-201ENST00000436573 652 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 OR2R1P-201ENST00000441404 914 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 ALG1L13P-202ENST00000519320 584 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 TMCO5B-205ENST00000530020 894 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 AC131206.1-201ENST00000538078 1211 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
CSPG5O95196 AC005041.3-201ENST00000606287 649 ntBASIC15.54■□□□□ 0.08
CSPG5O95196 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CSPG5O95196 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.54■□□□□ 0.08
CSPG5O95196 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.54■□□□□ 0.08
CSPG5O95196 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CSPG5O95196 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CSPG5O95196 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CSPG5O95196 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CSPG5O95196 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.53■□□□□ 0.08
CSPG5O95196 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CSPG5O95196 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CSPG5O95196 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.53■□□□□ 0.08
CSPG5O95196 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.53■□□□□ 0.08
CSPG5O95196 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.53■□□□□ 0.08
CSPG5O95196 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC15.53■□□□□ 0.08
CSPG5O95196 RN7SL470P-201ENST00000583069 259 ntBASIC15.53■□□□□ 0.08
CSPG5O95196 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.53■□□□□ 0.08
CSPG5O95196 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 AL109954.1-202ENST00000564051 2148 ntBASIC15.53■□□□□ 0.08
CSPG5O95196 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.53■□□□□ 0.08
CSPG5O95196 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CSPG5O95196 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CSPG5O95196 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.53■□□□□ 0.08
CSPG5O95196 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CSPG5O95196 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG5O95196 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG5O95196 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.52■□□□□ 0.08
CSPG5O95196 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.52■□□□□ 0.08
CSPG5O95196 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG5O95196 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CSPG5O95196 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms