Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC015909.3-201ENST00000572855 1794 ntBASIC16.23■□□□□ 0.19
CHMP2AO43633 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP2AO43633 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 LAP3P2-201ENST00000454686 1454 ntBASIC16.23■□□□□ 0.19
CHMP2AO43633 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP2AO43633 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 RNA5SP359-201ENST00000364838 113 ntBASIC16.23■□□□□ 0.19
CHMP2AO43633 AC239868.1-201ENST00000369385 493 ntBASIC16.23■□□□□ 0.19
CHMP2AO43633 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP2AO43633 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.23■□□□□ 0.19
CHMP2AO43633 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CHMP2AO43633 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP2AO43633 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 CU633904.3-201ENST00000624042 1029 ntBASIC16.23■□□□□ 0.19
CHMP2AO43633 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP2AO43633 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CHMP2AO43633 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP2AO43633 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.23■□□□□ 0.19
CHMP2AO43633 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHMP2AO43633 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 UCKL1-AS1-201ENST00000623569 3602 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CHMP2AO43633 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 AL662890.1-201ENST00000396818 632 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 AC092580.1-201ENST00000433998 658 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP2AO43633 AL133466.1-201ENST00000447582 150 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 RN7SL277P-201ENST00000481521 288 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 AC245884.6-201ENST00000515672 1067 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP2AO43633 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP2AO43633 MIR3619-201ENST00000579667 83 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 RN7SL574P-201ENST00000581512 297 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.22■□□□□ 0.19
CHMP2AO43633 AC097724.1-201ENST00000609581 426 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP2AO43633 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CHMP2AO43633 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CHMP2AO43633 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP2AO43633 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP2AO43633 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.22■□□□□ 0.19
CHMP2AO43633 AC007191.1-201ENST00000623179 2995 ntBASIC16.22■□□□□ 0.19
CHMP2AO43633 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.22■□□□□ 0.19
CHMP2AO43633 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHMP2AO43633 FRMPD2B-201ENST00000431305 1347 ntBASIC16.21■□□□□ 0.19
CHMP2AO43633 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CHMP2AO43633 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.21■□□□□ 0.19
CHMP2AO43633 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP2AO43633 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms