Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
DENRO43583 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DENRO43583 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DENRO43583 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
DENRO43583 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
DENRO43583 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.32□□□□□ -0.28
DENRO43583 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC13.32□□□□□ -0.28
DENRO43583 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13.32□□□□□ -0.28
DENRO43583 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.32□□□□□ -0.28
DENRO43583 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.32□□□□□ -0.28
DENRO43583 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.32□□□□□ -0.28
DENRO43583 ARSEP1-201ENST00000420443 635 ntBASIC13.32□□□□□ -0.28
DENRO43583 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.32□□□□□ -0.28
DENRO43583 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.32□□□□□ -0.28
DENRO43583 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 AC022616.1-201ENST00000518688 554 ntBASIC13.32□□□□□ -0.28
DENRO43583 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.32□□□□□ -0.28
DENRO43583 ALG1L8P-201ENST00000533887 760 ntBASIC13.32□□□□□ -0.28
DENRO43583 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 AL662844.1-201ENST00000546340 181 ntBASIC13.32□□□□□ -0.28
DENRO43583 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
DENRO43583 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
DENRO43583 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.32□□□□□ -0.28
DENRO43583 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.32□□□□□ -0.28
DENRO43583 AC092902.6-201ENST00000641783 218 ntBASIC13.32□□□□□ -0.28
DENRO43583 AC092139.4-201ENST00000624318 2794 ntBASIC13.32□□□□□ -0.28
DENRO43583 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DENRO43583 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC13.31□□□□□ -0.28
DENRO43583 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.31□□□□□ -0.28
DENRO43583 AC092902.2-210ENST00000468859 1996 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 PES1-205ENST00000405677 2708 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 USB1-207ENST00000563149 1751 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.31□□□□□ -0.28
DENRO43583 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.31□□□□□ -0.28
DENRO43583 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.31□□□□□ -0.28
DENRO43583 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DENRO43583 MTND6P24-201ENST00000440466 518 ntBASIC13.31□□□□□ -0.28
DENRO43583 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.31□□□□□ -0.28
DENRO43583 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.31□□□□□ -0.28
DENRO43583 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.31□□□□□ -0.28
DENRO43583 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms