Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 PDIA3P1-201ENST00000471856 1510 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AC015688.4-201ENST00000580780 1647 ntBASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
HLA-DRB4X5D2U9 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 AC009093.2-202ENST00000620513 2079 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 AC105206.1-202ENST00000314927 2368 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 MIR1202-201ENST00000408529 83 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 CROCCP4-201ENST00000457096 498 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 AP003171.2-201ENST00000528208 925 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 AC063926.2-201ENST00000623766 1308 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 FES-203ENST00000394302 2133 ntTSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 MYADML-201ENST00000474610 2147 ntBASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
HLA-DRB4X5D2U9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.96□□□□□ -0.65
HLA-DRB4X5D2U9 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms