Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 ELK2AP-201ENST00000392510 1007 ntBASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AL008707.1-201ENST00000422498 534 ntBASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AL354877.1-201ENST00000424412 413 ntBASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 CLUHP2-201ENST00000426660 1303 ntBASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AL023803.2-201ENST00000620080 638 ntBASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PCDHGB6Q9Y5F9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 AP003171.2-201ENST00000528208 925 ntBASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
PCDHGB6Q9Y5F9 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 AC015802.1-201ENST00000588104 1449 ntBASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PCDHGB6Q9Y5F9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms