Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CTDP1Q9Y5B0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 KRT17P5-201ENST00000332088 839 ntBASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 AC114947.1-202ENST00000514136 344 ntBASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 IQSEC3P1-201ENST00000538799 536 ntBASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 AL031713.1-201ENST00000564813 661 ntBASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 MIR5572-201ENST00000583188 137 ntBASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 AC092384.3-202ENST00000564646 2873 ntBASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CTDP1Q9Y5B0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 AL512430.1-201ENST00000392575 860 ntBASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 RN7SL181P-201ENST00000462921 277 ntBASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 SIGLEC18P-201ENST00000602271 909 ntBASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 AC073352.2-201ENST00000609385 439 ntBASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 AC087392.5-201ENST00000612517 489 ntBASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 MIR6727-201ENST00000620702 65 ntBASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.68■□□□□ 0.26
CTDP1Q9Y5B0 MARK2P16-201ENST00000605714 1723 ntBASIC16.67■□□□□ 0.26
CTDP1Q9Y5B0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTDP1Q9Y5B0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.67■□□□□ 0.26
CTDP1Q9Y5B0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTDP1Q9Y5B0 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.67■□□□□ 0.26
CTDP1Q9Y5B0 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms