Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
KCNIP3Q9Y2W7 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 AC003102.2-201ENST00000589195 1469 ntBASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 RPL13AP25-201ENST00000484130 612 ntBASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SORD2P-201ENST00000558556 1069 ntBASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 AP001972.5-201ENST00000624624 2338 ntBASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
KCNIP3Q9Y2W7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 DNAJB3-201ENST00000446806 729 ntBASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.16□□□□□ -0.46
KCNIP3Q9Y2W7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms