Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 HERC2P11-201ENST00000562845 725 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AC100756.2-201ENST00000569537 736 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AL161773.1-201ENST00000624845 863 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
COL20A1Q9P218 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
COL20A1Q9P218 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 KRT8P18-201ENST00000413425 1445 ntBASIC16.14■□□□□ 0.17
COL20A1Q9P218 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 AC018638.5-201ENST00000450885 754 ntBASIC16.14■□□□□ 0.17
COL20A1Q9P218 KRT18P15-201ENST00000458108 1291 ntBASIC16.14■□□□□ 0.17
COL20A1Q9P218 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 MIR6858-201ENST00000620733 67 ntBASIC16.14■□□□□ 0.17
COL20A1Q9P218 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 TUBB8P4-201ENST00000511806 1324 ntBASIC16.14■□□□□ 0.17
COL20A1Q9P218 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COL20A1Q9P218 TEKT4P2-202ENST00000559466 1312 ntBASIC16.14■□□□□ 0.17
COL20A1Q9P218 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL20A1Q9P218 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 AC098934.1-203ENST00000442868 1262 ntBASIC16.13■□□□□ 0.17
COL20A1Q9P218 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.13■□□□□ 0.17
COL20A1Q9P218 CHCHD2P2-201ENST00000503744 321 ntBASIC16.13■□□□□ 0.17
COL20A1Q9P218 CR383656.3-201ENST00000551315 183 ntBASIC16.13■□□□□ 0.17
COL20A1Q9P218 KRT8P43-201ENST00000406052 1458 ntBASIC16.13■□□□□ 0.17
COL20A1Q9P218 RPL13AP3-202ENST00000494676 1473 ntBASIC16.13■□□□□ 0.17
COL20A1Q9P218 AC068587.6-202ENST00000641839 5619 ntBASIC16.13■□□□□ 0.17
COL20A1Q9P218 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL20A1Q9P218 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms