Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 RNU1-114P-201ENST00000365297 166 ntBASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 FAM21FP-201ENST00000426241 1131 ntBASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 KRT90P-201ENST00000549264 1064 ntBASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AC145423.3-201ENST00000615987 467 ntBASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AC016397.2-201ENST00000624848 1985 ntBASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TIMMDC1Q9NPL8 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 TPT1P11-201ENST00000458482 498 ntBASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AC244669.2-201ENST00000612320 853 ntBASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AC132938.4-201ENST00000623835 848 ntBASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 PRSS30P-206ENST00000641773 873 ntBASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TIMMDC1Q9NPL8 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TIMMDC1Q9NPL8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms