Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AL445250.1-201ENST00000641671 2259 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LINC00115-201ENST00000473798 1317 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AC005034.1-201ENST00000426657 489 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 CSF2RBP1-201ENST00000447905 391 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 KRT17P7-201ENST00000451704 1104 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AL512310.5-201ENST00000551999 515 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AC021016.3-201ENST00000608367 477 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AL162274.1-201ENST00000617191 1098 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AL035252.4-201ENST00000624174 288 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AL161772.1-201ENST00000610494 4412 ntBASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RSPO3Q9BXY4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 SHMT1P1-201ENST00000419974 1312 ntBASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 RCC2P1-201ENST00000452257 1476 ntBASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.18□□□□□ -0.3
RSPO3Q9BXY4 SCARNA21-201ENST00000517026 139 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms