Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.79■□□□□ 0.92
SIN3AQ96ST3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 AC239868.1-201ENST00000369385 493 ntBASIC20.79■□□□□ 0.92
SIN3AQ96ST3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 PDIA3P2-201ENST00000428073 158 ntBASIC20.79■□□□□ 0.92
SIN3AQ96ST3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 AL512310.5-201ENST00000551999 515 ntBASIC20.79■□□□□ 0.92
SIN3AQ96ST3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 AC140658.4-201ENST00000561990 352 ntBASIC20.79■□□□□ 0.92
SIN3AQ96ST3 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 NAP1L6-202ENST00000641404 1222 ntBASIC20.79■□□□□ 0.92
SIN3AQ96ST3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SIN3AQ96ST3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 USP17L6P-201ENST00000382470 1197 ntBASIC20.78■□□□□ 0.92
SIN3AQ96ST3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 AC024681.1-201ENST00000521917 487 ntBASIC20.78■□□□□ 0.92
SIN3AQ96ST3 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SIN3AQ96ST3 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 CHMP4BP1-201ENST00000556017 588 ntBASIC20.77■□□□□ 0.92
SIN3AQ96ST3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AC097724.1-201ENST00000609581 426 ntBASIC20.77■□□□□ 0.92
SIN3AQ96ST3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AP001505.2-201ENST00000616815 443 ntBASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AC100757.4-201ENST00000626934 759 ntBASIC20.77■□□□□ 0.92
SIN3AQ96ST3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms