Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AC007952.5-201ENST00000572818 1486 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 ZNRD1-204ENST00000376785 754 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 RPL18AP16-201ENST00000424057 531 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AP000244.1-201ENST00000424582 201 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 UGT1A12P-201ENST00000447084 853 ntBASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 RNF7-205ENST00000480908 782 ntTSL 4 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.97□□□□□ -0.49
CSMD1Q96PZ7 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 CICP16-201ENST00000502609 2813 ntBASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 ODCP-201ENST00000459650 1639 ntBASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 AC073869.4-201ENST00000620841 800 ntBASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CSMD1Q96PZ7 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 LILRP1-201ENST00000444199 1370 ntBASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 AL136084.1-201ENST00000449172 318 ntBASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 AC093495.1-215ENST00000626655 821 ntTSL 5 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
CSMD1Q96PZ7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AC103563.1-201ENST00000429316 123 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 ABCD1P3-201ENST00000562927 605 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 KHSRPP1-201ENST00000427983 1768 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 RN7SL87P-201ENST00000497657 288 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 PPY-202ENST00000587006 431 ntTSL 3 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AC009041.4-201ENST00000620075 638 ntBASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CSMD1Q96PZ7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms