Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AL157996.1-201ENST00000624684 2299 ntBASIC13.55□□□□□ -0.24
NUP43Q8NFH3 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 USP17L6P-201ENST00000382470 1197 ntBASIC13.55□□□□□ -0.24
NUP43Q8NFH3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.55□□□□□ -0.24
NUP43Q8NFH3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AC022210.1-201ENST00000449856 793 ntBASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 EEF1DP1-201ENST00000585891 896 ntBASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AC009884.2-201ENST00000603110 324 ntBASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 AL031595.1-201ENST00000623969 4709 ntBASIC13.55□□□□□ -0.24
NUP43Q8NFH3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
NUP43Q8NFH3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 AL354877.1-201ENST00000424412 413 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 FAM58BP-201ENST00000439056 645 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 KLF2P1-201ENST00000447438 1042 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 KRT223P-202ENST00000449164 1292 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 AC021016.3-201ENST00000608367 477 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 Z98259.2-201ENST00000641583 609 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 REXO1L6P-201ENST00000603433 1515 ntBASIC13.54□□□□□ -0.24
NUP43Q8NFH3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
NUP43Q8NFH3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AC092053.3-201ENST00000641308 4975 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 AC087386.2-201ENST00000623212 4637 ntBASIC13.53□□□□□ -0.24
NUP43Q8NFH3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.53□□□□□ -0.24
NUP43Q8NFH3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms