Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
XRN1Q8IZH2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.27■□□□□ 0.67
XRN1Q8IZH2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 ABCC6P1-203ENST00000565566 1170 ntBASIC19.26■□□□□ 0.67
XRN1Q8IZH2 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 AC023157.3-201ENST00000619086 2088 ntBASIC19.26■□□□□ 0.67
XRN1Q8IZH2 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 CICP14-201ENST00000629111 2732 ntBASIC19.26■□□□□ 0.67
XRN1Q8IZH2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC19.26■□□□□ 0.67
XRN1Q8IZH2 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AL356000.1-201ENST00000441073 1238 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AC007679.1-201ENST00000458609 502 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 NDUFB2P1-201ENST00000506966 295 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 EMP3-204ENST00000596315 761 ntTSL 2 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AC093462.1-201ENST00000621167 1683 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AC026412.1-206ENST00000502273 206 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 OR52V1P-201ENST00000515557 898 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 PHBP18-201ENST00000546648 813 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AC087072.1-201ENST00000603727 421 ntBASIC19.25■□□□□ 0.67
XRN1Q8IZH2 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
XRN1Q8IZH2 RCC2P1-201ENST00000452257 1476 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 AC007279.1-201ENST00000448547 837 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 RNA5SP288-201ENST00000516075 93 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 RN7SL480P-201ENST00000581481 294 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 IFNL3P1-201ENST00000595082 501 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 MIR6893-201ENST00000613458 69 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC19.24■□□□□ 0.67
XRN1Q8IZH2 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
XRN1Q8IZH2 GUCY2EP-203ENST00000531117 1918 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms