Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP31Q70CQ4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP31Q70CQ4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP31Q70CQ4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP31Q70CQ4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.84■□□□□ 0.61
USP31Q70CQ4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP31Q70CQ4 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP31Q70CQ4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP31Q70CQ4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP31Q70CQ4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP31Q70CQ4 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
USP31Q70CQ4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 OR51A9P-201ENST00000422578 911 ntBASIC18.83■□□□□ 0.61
USP31Q70CQ4 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 AL451000.1-201ENST00000451300 1186 ntBASIC18.83■□□□□ 0.61
USP31Q70CQ4 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 RN7SL147P-201ENST00000487345 298 ntBASIC18.83■□□□□ 0.61
USP31Q70CQ4 RBM4-207ENST00000506523 654 ntTSL 3 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 HNRNPA1P5-201ENST00000558213 966 ntBASIC18.83■□□□□ 0.61
USP31Q70CQ4 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 AL160191.2-201ENST00000603975 601 ntBASIC18.83■□□□□ 0.61
USP31Q70CQ4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 AC005274.1-201ENST00000623460 802 ntBASIC18.83■□□□□ 0.61
USP31Q70CQ4 RARS-210ENST00000626454 177 ntTSL 5 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP31Q70CQ4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 SALL4P6-201ENST00000429385 1691 ntBASIC18.83■□□□□ 0.61
USP31Q70CQ4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USP31Q70CQ4 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
USP31Q70CQ4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.83■□□□□ 0.6
USP31Q70CQ4 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC18.83■□□□□ 0.6
USP31Q70CQ4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USP31Q70CQ4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 OR10N1P-201ENST00000392758 869 ntBASIC18.82■□□□□ 0.6
USP31Q70CQ4 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 DDX39AP1-201ENST00000445147 1181 ntBASIC18.82■□□□□ 0.6
USP31Q70CQ4 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 AC083801.1-201ENST00000491689 358 ntBASIC18.82■□□□□ 0.6
USP31Q70CQ4 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 AL359219.1-201ENST00000556311 934 ntBASIC18.82■□□□□ 0.6
USP31Q70CQ4 APOC1-209ENST00000592885 562 ntTSL 3 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC18.82■□□□□ 0.6
USP31Q70CQ4 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 FKBP4P8-201ENST00000610931 1369 ntBASIC18.82■□□□□ 0.6
USP31Q70CQ4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
USP31Q70CQ4 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USP31Q70CQ4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP31Q70CQ4 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP31Q70CQ4 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 MIR1307-201ENST00000408840 149 ntBASIC18.81■□□□□ 0.6
USP31Q70CQ4 AL512599.1-201ENST00000430724 685 ntBASIC18.81■□□□□ 0.6
USP31Q70CQ4 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 HNRNPA1P56-201ENST00000505767 954 ntBASIC18.81■□□□□ 0.6
USP31Q70CQ4 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 MIR8071-1-201ENST00000616769 65 ntBASIC18.81■□□□□ 0.6
USP31Q70CQ4 MIR8071-2-201ENST00000616772 65 ntBASIC18.81■□□□□ 0.6
USP31Q70CQ4 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.81■□□□□ 0.6
USP31Q70CQ4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP31Q70CQ4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms