Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
RFX7Q2KHR2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 LINC01815-202ENST00000641468 1409 ntBASIC17.28■□□□□ 0.36
RFX7Q2KHR2 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AK2P2-201ENST00000439142 405 ntBASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 FTH1P22-201ENST00000456305 520 ntBASIC17.28■□□□□ 0.36
RFX7Q2KHR2 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 RN7SL736P-201ENST00000613111 269 ntBASIC17.28■□□□□ 0.36
RFX7Q2KHR2 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.28■□□□□ 0.36
RFX7Q2KHR2 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 AMT-256ENST00000638063 1783 ntTSL 5 BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.27■□□□□ 0.36
RFX7Q2KHR2 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.27■□□□□ 0.35
RFX7Q2KHR2 RN7SL277P-201ENST00000481521 288 ntBASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms