Protein–RNA interactions for Protein: Q16740

CLPP, ATP-dependent Clp protease proteolytic subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPPQ16740 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.02□□□□□ -0.16
CLPPQ16740 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPPQ16740 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPPQ16740 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPPQ16740 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLPPQ16740 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.02□□□□□ -0.16
CLPPQ16740 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.02□□□□□ -0.16
CLPPQ16740 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.02□□□□□ -0.16
CLPPQ16740 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPPQ16740 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLPPQ16740 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.02□□□□□ -0.16
CLPPQ16740 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.02□□□□□ -0.16
CLPPQ16740 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CLPPQ16740 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 KRT18P9-201ENST00000604826 1300 ntBASIC14.02□□□□□ -0.17
CLPPQ16740 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CLPPQ16740 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.02□□□□□ -0.17
CLPPQ16740 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 AC091046.1-201ENST00000331871 207 ntBASIC14.02□□□□□ -0.17
CLPPQ16740 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.02□□□□□ -0.17
CLPPQ16740 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.02□□□□□ -0.17
CLPPQ16740 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.02□□□□□ -0.17
CLPPQ16740 AC098935.1-201ENST00000446057 611 ntBASIC14.02□□□□□ -0.17
CLPPQ16740 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.02□□□□□ -0.17
CLPPQ16740 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.02□□□□□ -0.17
CLPPQ16740 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.02□□□□□ -0.17
CLPPQ16740 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.02□□□□□ -0.17
CLPPQ16740 AC093752.3-201ENST00000567343 901 ntBASIC14.02□□□□□ -0.17
CLPPQ16740 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.02□□□□□ -0.17
CLPPQ16740 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.02□□□□□ -0.17
CLPPQ16740 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.02□□□□□ -0.17
CLPPQ16740 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
CLPPQ16740 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CLPPQ16740 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.02□□□□□ -0.17
CLPPQ16740 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.02□□□□□ -0.17
CLPPQ16740 AC136621.1-201ENST00000624017 2304 ntBASIC14.02□□□□□ -0.17
CLPPQ16740 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLPPQ16740 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.02□□□□□ -0.17
CLPPQ16740 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.01□□□□□ -0.17
CLPPQ16740 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.01□□□□□ -0.17
CLPPQ16740 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CLPPQ16740 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.01□□□□□ -0.17
CLPPQ16740 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.01□□□□□ -0.17
CLPPQ16740 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.01□□□□□ -0.17
CLPPQ16740 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.01□□□□□ -0.17
CLPPQ16740 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.01□□□□□ -0.17
CLPPQ16740 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.01□□□□□ -0.17
CLPPQ16740 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 AC114947.1-202ENST00000514136 344 ntBASIC14.01□□□□□ -0.17
CLPPQ16740 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.01□□□□□ -0.17
CLPPQ16740 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 PGAM1P5-201ENST00000548011 764 ntBASIC14.01□□□□□ -0.17
CLPPQ16740 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.01□□□□□ -0.17
CLPPQ16740 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLPPQ16740 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.01□□□□□ -0.17
CLPPQ16740 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.01□□□□□ -0.17
CLPPQ16740 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.01□□□□□ -0.17
CLPPQ16740 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLPPQ16740 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms