Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 AC142086.5-202ENST00000562500 217 ntBASIC16.21■□□□□ 0.19
SREBF2Q12772 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC16.21■□□□□ 0.19
SREBF2Q12772 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC16.21■□□□□ 0.19
SREBF2Q12772 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC16.21■□□□□ 0.19
SREBF2Q12772 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SREBF2Q12772 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SREBF2Q12772 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.21■□□□□ 0.19
SREBF2Q12772 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SREBF2Q12772 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
SREBF2Q12772 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SREBF2Q12772 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SREBF2Q12772 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.2■□□□□ 0.18
SREBF2Q12772 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 AL365203.3-201ENST00000609742 2057 ntBASIC16.2■□□□□ 0.18
SREBF2Q12772 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC16.2■□□□□ 0.18
SREBF2Q12772 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.2■□□□□ 0.18
SREBF2Q12772 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SREBF2Q12772 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SREBF2Q12772 HLA-DMA-202ENST00000395303 1007 ntBASIC16.2■□□□□ 0.18
SREBF2Q12772 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 INO80E-209ENST00000567254 625 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC16.2■□□□□ 0.18
SREBF2Q12772 AL049840.2-201ENST00000602722 535 ntBASIC16.2■□□□□ 0.18
SREBF2Q12772 AC254633.1-201ENST00000606790 345 ntBASIC16.2■□□□□ 0.18
SREBF2Q12772 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SREBF2Q12772 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.2■□□□□ 0.18
SREBF2Q12772 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.2■□□□□ 0.18
SREBF2Q12772 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.2■□□□□ 0.18
SREBF2Q12772 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 AL391005.1-201ENST00000623953 2435 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.19■□□□□ 0.18
SREBF2Q12772 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.19■□□□□ 0.18
SREBF2Q12772 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SREBF2Q12772 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC16.19■□□□□ 0.18
SREBF2Q12772 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.19■□□□□ 0.18
SREBF2Q12772 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 U3.5-201ENST00000363448 216 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 AC103592.1-201ENST00000394513 664 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 AL359092.2-201ENST00000423330 585 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 AC103563.1-201ENST00000429316 123 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 AL356000.1-201ENST00000441073 1238 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 IGKV1OR-2-201ENST00000457995 350 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 RPL29P2-201ENST00000488409 460 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.19■□□□□ 0.18
SREBF2Q12772 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.19■□□□□ 0.18
SREBF2Q12772 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.19■□□□□ 0.18
SREBF2Q12772 LY6E-215ENST00000523847 427 ntTSL 3 BASIC16.19■□□□□ 0.18
SREBF2Q12772 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 GRAMD4P6-201ENST00000556999 244 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 FAM187B2P-201ENST00000577135 713 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.19■□□□□ 0.18
SREBF2Q12772 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 MIR6125-201ENST00000618986 96 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 AC020922.4-201ENST00000621389 339 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC16.19■□□□□ 0.18
SREBF2Q12772 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.19■□□□□ 0.18
SREBF2Q12772 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.19■□□□□ 0.18
SREBF2Q12772 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SREBF2Q12772 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms