Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
EPHB4P54760 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
EPHB4P54760 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
EPHB4P54760 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHB4P54760 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHB4P54760 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
EPHB4P54760 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.28■□□□□ 0.2
EPHB4P54760 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.28■□□□□ 0.2
EPHB4P54760 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.28■□□□□ 0.2
EPHB4P54760 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.28■□□□□ 0.2
EPHB4P54760 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 MIR6769A-201ENST00000617340 73 ntBASIC16.28■□□□□ 0.2
EPHB4P54760 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
EPHB4P54760 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EPHB4P54760 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHB4P54760 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
EPHB4P54760 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
EPHB4P54760 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
EPHB4P54760 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.27■□□□□ 0.2
EPHB4P54760 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
EPHB4P54760 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC16.27■□□□□ 0.2
EPHB4P54760 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
EPHB4P54760 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.27■□□□□ 0.2
EPHB4P54760 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
EPHB4P54760 AL592076.1-201ENST00000424448 303 ntBASIC16.27■□□□□ 0.2
EPHB4P54760 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.27■□□□□ 0.2
EPHB4P54760 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms