Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
TUBP50607 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBP50607 AC118758.2-201ENST00000614242 2813 ntBASIC15.27■□□□□ 0.03
TUBP50607 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC15.27■□□□□ 0.03
TUBP50607 CYP4F23P-201ENST00000593402 1579 ntBASIC15.27■□□□□ 0.03
TUBP50607 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TUBP50607 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TUBP50607 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TUBP50607 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.27■□□□□ 0.03
TUBP50607 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
TUBP50607 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.27■□□□□ 0.03
TUBP50607 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TUBP50607 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TUBP50607 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TUBP50607 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBP50607 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBP50607 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBP50607 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBP50607 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.26■□□□□ 0.03
TUBP50607 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TUBP50607 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 AC006335.1-201ENST00000445200 547 ntBASIC15.26■□□□□ 0.03
TUBP50607 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBP50607 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.26■□□□□ 0.03
TUBP50607 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
TUBP50607 AC024681.1-201ENST00000521917 487 ntBASIC15.26■□□□□ 0.03
TUBP50607 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.26■□□□□ 0.03
TUBP50607 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TUBP50607 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
TUBP50607 AC091812.3-201ENST00000621362 345 ntBASIC15.26■□□□□ 0.03
TUBP50607 NAP1L6-202ENST00000641404 1222 ntBASIC15.26■□□□□ 0.03
TUBP50607 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TUBP50607 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TUBP50607 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.26■□□□□ 0.03
TUBP50607 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.25■□□□□ 0.03
TUBP50607 AC015688.4-201ENST00000580780 1647 ntBASIC15.25■□□□□ 0.03
TUBP50607 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TUBP50607 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBP50607 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.25■□□□□ 0.03
TUBP50607 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.25■□□□□ 0.03
TUBP50607 Z97180.1-201ENST00000445173 988 ntBASIC15.25■□□□□ 0.03
TUBP50607 AL596276.2-201ENST00000447525 331 ntBASIC15.25■□□□□ 0.03
TUBP50607 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.25■□□□□ 0.03
TUBP50607 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
TUBP50607 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBP50607 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms