Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.85□□□□□ -0.35
LHX2P50458 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.85□□□□□ -0.35
LHX2P50458 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 LINC01815-202ENST00000641468 1409 ntBASIC12.85□□□□□ -0.35
LHX2P50458 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LHX2P50458 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LHX2P50458 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 AC091046.1-201ENST00000331871 207 ntBASIC12.84□□□□□ -0.35
LHX2P50458 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LHX2P50458 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
LHX2P50458 AL627231.1-201ENST00000394467 1125 ntBASIC12.84□□□□□ -0.35
LHX2P50458 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 AL512310.5-201ENST00000551999 515 ntBASIC12.84□□□□□ -0.35
LHX2P50458 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.84□□□□□ -0.35
LHX2P50458 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 PRKXP1-201ENST00000561423 1122 ntBASIC12.84□□□□□ -0.35
LHX2P50458 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.84□□□□□ -0.35
LHX2P50458 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
LHX2P50458 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 AC020910.6-201ENST00000623084 1459 ntBASIC12.84□□□□□ -0.35
LHX2P50458 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
LHX2P50458 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
LHX2P50458 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
LHX2P50458 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LHX2P50458 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.35
LHX2P50458 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.83□□□□□ -0.35
LHX2P50458 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.83□□□□□ -0.35
LHX2P50458 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
LHX2P50458 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.83□□□□□ -0.35
LHX2P50458 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LHX2P50458 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
LHX2P50458 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.83□□□□□ -0.36
LHX2P50458 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LHX2P50458 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
LHX2P50458 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 AC019193.1-201ENST00000506678 823 ntBASIC12.83□□□□□ -0.36
LHX2P50458 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.83□□□□□ -0.36
LHX2P50458 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms