Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC107373.2-201ENST00000607735 490 ntBASIC11.5□□□□□ -0.57
CDC34P49427 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 RAB34-224ENST00000636513 888 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 AC003102.2-201ENST00000589195 1469 ntBASIC11.5□□□□□ -0.57
CDC34P49427 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CDC34P49427 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
CDC34P49427 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC11.5□□□□□ -0.57
CDC34P49427 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 TNRC18P1-201ENST00000502875 3650 ntBASIC11.49□□□□□ -0.57
CDC34P49427 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.49□□□□□ -0.57
CDC34P49427 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 MIR1224-201ENST00000408193 85 ntBASIC11.49□□□□□ -0.57
CDC34P49427 HTR5BP-201ENST00000430851 1154 ntBASIC11.49□□□□□ -0.57
CDC34P49427 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 AC010336.2-201ENST00000564226 506 ntBASIC11.49□□□□□ -0.57
CDC34P49427 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
CDC34P49427 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CDC34P49427 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CDC34P49427 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.49□□□□□ -0.57
CDC34P49427 MAPK10-262ENST00000641051 5738 ntBASIC11.49□□□□□ -0.57
CDC34P49427 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
CDC34P49427 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.48□□□□□ -0.57
CDC34P49427 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 TRIM80P-201ENST00000455685 2848 ntBASIC11.48□□□□□ -0.57
CDC34P49427 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.48□□□□□ -0.57
CDC34P49427 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
CDC34P49427 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
CDC34P49427 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.48□□□□□ -0.57
CDC34P49427 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
CDC34P49427 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.48□□□□□ -0.57
CDC34P49427 AC136604.1-202ENST00000425471 771 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms