Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD4P46934 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD4P46934 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
NEDD4P46934 OR8T1P-201ENST00000421347 918 ntBASIC16.91■□□□□ 0.3
NEDD4P46934 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD4P46934 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD4P46934 RHEB-207ENST00000496004 744 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD4P46934 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
NEDD4P46934 CHMP4BP1-201ENST00000556017 588 ntBASIC16.91■□□□□ 0.3
NEDD4P46934 AL161670.2-201ENST00000557650 1227 ntBASIC16.91■□□□□ 0.3
NEDD4P46934 MIR3619-201ENST00000579667 83 ntBASIC16.91■□□□□ 0.3
NEDD4P46934 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.91■□□□□ 0.3
NEDD4P46934 AL109837.1-201ENST00000603272 613 ntBASIC16.91■□□□□ 0.3
NEDD4P46934 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16.91■□□□□ 0.3
NEDD4P46934 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NEDD4P46934 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
NEDD4P46934 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
NEDD4P46934 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD4P46934 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD4P46934 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD4P46934 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD4P46934 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.9■□□□□ 0.3
NEDD4P46934 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
NEDD4P46934 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.9■□□□□ 0.3
NEDD4P46934 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NEDD4P46934 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
NEDD4P46934 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.89■□□□□ 0.3
NEDD4P46934 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
NEDD4P46934 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
NEDD4P46934 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NEDD4P46934 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
NEDD4P46934 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NEDD4P46934 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NEDD4P46934 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NEDD4P46934 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.89■□□□□ 0.29
NEDD4P46934 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NEDD4P46934 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms