Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 AC005252.3-201ENST00000623855 2258 ntBASIC12.45□□□□□ -0.42
TNFSF4P23510 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
TNFSF4P23510 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.45□□□□□ -0.42
TNFSF4P23510 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TNFSF4P23510 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 AC023908.3-201ENST00000564211 3047 ntBASIC12.44□□□□□ -0.42
TNFSF4P23510 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 AC005089.1-201ENST00000619486 2241 ntBASIC12.44□□□□□ -0.42
TNFSF4P23510 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 HNRNPA1P32-201ENST00000396326 963 ntBASIC12.44□□□□□ -0.42
TNFSF4P23510 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 AC006033.1-201ENST00000440505 426 ntBASIC12.44□□□□□ -0.42
TNFSF4P23510 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TNFSF4P23510 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 AC108725.1-201ENST00000495472 409 ntBASIC12.44□□□□□ -0.42
TNFSF4P23510 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.44□□□□□ -0.42
TNFSF4P23510 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.44□□□□□ -0.42
TNFSF4P23510 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
TNFSF4P23510 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 CICP24-201ENST00000605464 2705 ntBASIC12.44□□□□□ -0.42
TNFSF4P23510 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.44□□□□□ -0.42
TNFSF4P23510 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.44□□□□□ -0.42
TNFSF4P23510 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TNFSF4P23510 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.43□□□□□ -0.42
TNFSF4P23510 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
TNFSF4P23510 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TNFSF4P23510 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.43□□□□□ -0.42
TNFSF4P23510 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TNFSF4P23510 AL157407.1-201ENST00000435784 904 ntBASIC12.43□□□□□ -0.42
TNFSF4P23510 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms