Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 AL022313.4-201ENST00000562756 2046 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 LINC02486-201ENST00000604157 3000 ntBASIC12.74□□□□□ -0.37
RAB3BP20337 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
RAB3BP20337 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.74□□□□□ -0.37
RAB3BP20337 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
RAB3BP20337 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
RAB3BP20337 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RAB3BP20337 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
RAB3BP20337 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 USP17L6P-201ENST00000382470 1197 ntBASIC12.73□□□□□ -0.37
RAB3BP20337 AC136604.1-202ENST00000425471 771 ntBASIC12.73□□□□□ -0.37
RAB3BP20337 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 EIF3FP3-201ENST00000434851 1086 ntBASIC12.73□□□□□ -0.37
RAB3BP20337 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.73□□□□□ -0.37
RAB3BP20337 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.73□□□□□ -0.37
RAB3BP20337 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.73□□□□□ -0.37
RAB3BP20337 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 AL662799.1-202ENST00000614205 422 ntBASIC12.73□□□□□ -0.37
RAB3BP20337 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
RAB3BP20337 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 OS9-206ENST00000435406 2346 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.73□□□□□ -0.37
RAB3BP20337 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RAB3BP20337 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.73□□□□□ -0.37
RAB3BP20337 LRRC59-203ENST00000576448 1531 ntBASIC12.72□□□□□ -0.37
RAB3BP20337 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 MIR193BHG-211ENST00000641433 5365 ntBASIC12.72□□□□□ -0.37
RAB3BP20337 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB3BP20337 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RAB3BP20337 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.72□□□□□ -0.37
RAB3BP20337 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB3BP20337 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB3BP20337 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.72□□□□□ -0.37
RAB3BP20337 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms