Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.65□□□□□ -0.54
ACANP16112 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ACANP16112 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
ACANP16112 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.65□□□□□ -0.55
ACANP16112 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ACANP16112 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC11.65□□□□□ -0.55
ACANP16112 AC103563.1-201ENST00000429316 123 ntBASIC11.65□□□□□ -0.55
ACANP16112 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC11.65□□□□□ -0.55
ACANP16112 SAP18P2-201ENST00000434334 459 ntBASIC11.65□□□□□ -0.55
ACANP16112 AC022447.5-201ENST00000504817 392 ntBASIC11.65□□□□□ -0.55
ACANP16112 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC11.65□□□□□ -0.55
ACANP16112 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC11.65□□□□□ -0.55
ACANP16112 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC11.65□□□□□ -0.55
ACANP16112 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
ACANP16112 AC004801.1-201ENST00000549557 360 ntBASIC11.65□□□□□ -0.55
ACANP16112 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC11.65□□□□□ -0.55
ACANP16112 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC11.65□□□□□ -0.55
ACANP16112 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
ACANP16112 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.65□□□□□ -0.55
ACANP16112 AL009176.1-201ENST00000607876 650 ntBASIC11.65□□□□□ -0.55
ACANP16112 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
ACANP16112 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC11.65□□□□□ -0.55
ACANP16112 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
ACANP16112 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC11.65□□□□□ -0.55
ACANP16112 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC11.65□□□□□ -0.55
ACANP16112 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ACANP16112 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
ACANP16112 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
ACANP16112 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 HR-201ENST00000312841 5351 ntTSL 5 BASIC11.64□□□□□ -0.55
ACANP16112 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.64□□□□□ -0.55
ACANP16112 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.64□□□□□ -0.55
ACANP16112 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 BX679664.3-201ENST00000414070 555 ntBASIC11.64□□□□□ -0.55
ACANP16112 AC113935.1-201ENST00000471722 555 ntBASIC11.64□□□□□ -0.55
ACANP16112 AC004923.3-201ENST00000527532 355 ntBASIC11.64□□□□□ -0.55
ACANP16112 GRAMD4P6-201ENST00000556999 244 ntBASIC11.64□□□□□ -0.55
ACANP16112 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
ACANP16112 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
ACANP16112 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 AC103702.1-201ENST00000548801 2630 ntBASIC11.64□□□□□ -0.55
ACANP16112 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
ACANP16112 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.64□□□□□ -0.55
ACANP16112 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.64□□□□□ -0.55
ACANP16112 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
ACANP16112 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 SSR4-202ENST00000370085 526 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC11.64□□□□□ -0.55
ACANP16112 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC11.64□□□□□ -0.55
ACANP16112 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC11.64□□□□□ -0.55
ACANP16112 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC11.64□□□□□ -0.55
ACANP16112 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC11.64□□□□□ -0.55
ACANP16112 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ACANP16112 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC11.63□□□□□ -0.55
ACANP16112 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ACANP16112 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ACANP16112 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
ACANP16112 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
ACANP16112 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
ACANP16112 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ACANP16112 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ACANP16112 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.63□□□□□ -0.55
ACANP16112 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ACANP16112 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.63□□□□□ -0.55
ACANP16112 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
ACANP16112 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms