Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VCANP13611 MIR632-201ENST00000385193 94 ntBASIC14.45□□□□□ -0.1
VCANP13611 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VCANP13611 ABCD1P4-201ENST00000399687 604 ntBASIC14.45□□□□□ -0.1
VCANP13611 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
VCANP13611 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC14.45□□□□□ -0.1
VCANP13611 GYG1-209ENST00000483267 801 ntTSL 2 BASIC14.45□□□□□ -0.1
VCANP13611 RN7SKP155-201ENST00000516031 288 ntBASIC14.45□□□□□ -0.1
VCANP13611 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VCANP13611 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
VCANP13611 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.45□□□□□ -0.1
VCANP13611 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
VCANP13611 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.45□□□□□ -0.1
VCANP13611 RPL3P2-204ENST00000413027 1203 ntBASIC14.45□□□□□ -0.1
VCANP13611 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 RN7SL76P-201ENST00000482435 289 ntBASIC14.45□□□□□ -0.1
VCANP13611 RN7SL47P-201ENST00000488710 299 ntBASIC14.45□□□□□ -0.1
VCANP13611 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC14.45□□□□□ -0.1
VCANP13611 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.45□□□□□ -0.1
VCANP13611 AC091905.3-201ENST00000624959 234 ntBASIC14.45□□□□□ -0.1
VCANP13611 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC14.45□□□□□ -0.1
VCANP13611 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC14.45□□□□□ -0.1
VCANP13611 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.45□□□□□ -0.1
VCANP13611 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
VCANP13611 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VCANP13611 SFPQP1-201ENST00000446621 1786 ntBASIC14.44□□□□□ -0.1
VCANP13611 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
VCANP13611 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC14.44□□□□□ -0.1
VCANP13611 AC068134.4-201ENST00000613365 122 ntBASIC14.44□□□□□ -0.1
VCANP13611 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 AC007686.3-201ENST00000619017 3487 ntBASIC14.44□□□□□ -0.1
VCANP13611 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
VCANP13611 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 AC105917.1-201ENST00000506637 2539 ntBASIC14.44□□□□□ -0.1
VCANP13611 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 AC092115.1-201ENST00000566277 1402 ntBASIC14.44□□□□□ -0.1
VCANP13611 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 AL137077.1-201ENST00000442115 528 ntBASIC14.44□□□□□ -0.1
VCANP13611 NME6-211ENST00000447314 621 ntTSL 3 BASIC14.44□□□□□ -0.1
VCANP13611 GRPEL2P1-201ENST00000453145 339 ntBASIC14.44□□□□□ -0.1
VCANP13611 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.44□□□□□ -0.1
VCANP13611 PTMAP5-202ENST00000607242 1162 ntBASIC14.44□□□□□ -0.1
VCANP13611 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.44□□□□□ -0.1
VCANP13611 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
VCANP13611 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
VCANP13611 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 AC097359.2-201ENST00000604992 2389 ntBASIC14.44□□□□□ -0.1
VCANP13611 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VCANP13611 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.44□□□□□ -0.1
VCANP13611 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 AC092573.1-201ENST00000433054 884 ntBASIC14.43□□□□□ -0.1
VCANP13611 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC14.43□□□□□ -0.1
VCANP13611 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
VCANP13611 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 LINC02486-201ENST00000604157 3000 ntBASIC14.43□□□□□ -0.1
VCANP13611 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
VCANP13611 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VCANP13611 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 RBMX2P5-201ENST00000424312 969 ntBASIC14.43□□□□□ -0.1
VCANP13611 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.43□□□□□ -0.1
VCANP13611 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
VCANP13611 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
VCANP13611 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms