Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 TCAM1P-207ENST00000485295 1537 ntBASIC10.87□□□□□ -0.67
SMIM17P0DL12 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SMIM17P0DL12 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 AC019294.4-201ENST00000561777 2905 ntBASIC10.87□□□□□ -0.67
SMIM17P0DL12 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
SMIM17P0DL12 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM17P0DL12 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
SMIM17P0DL12 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM17P0DL12 LPO-204ENST00000543544 2350 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM17P0DL12 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC10.87□□□□□ -0.67
SMIM17P0DL12 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
SMIM17P0DL12 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 MXRA5Y-201ENST00000420610 8000 ntBASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 BX324167.2-201ENST00000623717 3316 ntBASIC10.86□□□□□ -0.67
SMIM17P0DL12 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 SLBP-205ENST00000488267 987 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AL596442.2-201ENST00000610240 980 ntBASIC10.86□□□□□ -0.67
SMIM17P0DL12 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AL158070.2-201ENST00000623713 1621 ntBASIC10.86□□□□□ -0.67
SMIM17P0DL12 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC004834.1-202ENST00000638785 1737 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
SMIM17P0DL12 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC10.86□□□□□ -0.67
SMIM17P0DL12 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 AC073548.1-201ENST00000624088 1882 ntBASIC10.85□□□□□ -0.67
SMIM17P0DL12 INE2-201ENST00000630399 1874 ntBASIC10.85□□□□□ -0.67
SMIM17P0DL12 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 HERC2P9-206ENST00000529624 5187 ntBASIC10.85□□□□□ -0.67
SMIM17P0DL12 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
SMIM17P0DL12 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.85□□□□□ -0.67
SMIM17P0DL12 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.85□□□□□ -0.67
SMIM17P0DL12 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms