Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 MIR339-201ENST00000362153 94 ntBASIC8.62□□□□□ -1.03
APOBP04114 OR7E155P-201ENST00000412208 1014 ntBASIC8.62□□□□□ -1.03
APOBP04114 RN7SL47P-201ENST00000488710 299 ntBASIC8.62□□□□□ -1.03
APOBP04114 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 AC079331.1-201ENST00000623200 1200 ntBASIC8.62□□□□□ -1.03
APOBP04114 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 STK25-235ENST00000543554 2556 ntTSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC8.62□□□□□ -1.03
APOBP04114 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 TUBB2BP1-201ENST00000404155 871 ntBASIC8.62□□□□□ -1.03
APOBP04114 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 AC104115.1-201ENST00000484005 623 ntBASIC8.62□□□□□ -1.03
APOBP04114 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC8.62□□□□□ -1.03
APOBP04114 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC8.62□□□□□ -1.03
APOBP04114 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC8.62□□□□□ -1.03
APOBP04114 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 AC245369.3-201ENST00000624687 411 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
APOBP04114 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
APOBP04114 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC8.62□□□□□ -1.03
APOBP04114 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
APOBP04114 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC8.61□□□□□ -1.03
APOBP04114 POLR3DP1-201ENST00000398689 1176 ntBASIC8.61□□□□□ -1.03
APOBP04114 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 MIR1307-201ENST00000408840 149 ntBASIC8.61□□□□□ -1.03
APOBP04114 ALMS1P1-201ENST00000428767 921 ntBASIC8.61□□□□□ -1.03
APOBP04114 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 AC008622.3-201ENST00000621170 600 ntBASIC8.61□□□□□ -1.03
APOBP04114 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC8.61□□□□□ -1.03
APOBP04114 RNA5SP288-201ENST00000516075 93 ntBASIC8.61□□□□□ -1.03
APOBP04114 AC239600.1-201ENST00000603201 462 ntBASIC8.61□□□□□ -1.03
APOBP04114 BX510359.7-201ENST00000619819 630 ntBASIC8.61□□□□□ -1.03
APOBP04114 COG6-212ENST00000630730 186 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
APOBP04114 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC8.61□□□□□ -1.03
APOBP04114 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
APOBP04114 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC8.61□□□□□ -1.03
APOBP04114 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC8.61□□□□□ -1.03
APOBP04114 SORD2P-201ENST00000558556 1069 ntBASIC8.61□□□□□ -1.03
APOBP04114 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC8.61□□□□□ -1.03
APOBP04114 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC8.61□□□□□ -1.03
APOBP04114 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
APOBP04114 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms