Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.72□□□□□ -0.21
MT-ND1P03886 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
MT-ND1P03886 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 AC125807.2-201ENST00000513358 3514 ntBASIC13.72□□□□□ -0.21
MT-ND1P03886 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MT-ND1P03886 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.72□□□□□ -0.21
MT-ND1P03886 AC073869.1-201ENST00000415574 2762 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 AL928654.5-201ENST00000624831 2501 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 KRT8P35-201ENST00000483942 1338 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 TUBB8P4-201ENST00000511806 1324 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 TLE1P1-201ENST00000422965 589 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 GNAQP1-201ENST00000444815 1067 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.71□□□□□ -0.21
MT-ND1P03886 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 AC131206.1-201ENST00000538078 1211 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.71□□□□□ -0.21
MT-ND1P03886 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.71□□□□□ -0.21
MT-ND1P03886 AC120045.2-201ENST00000567334 178 ntBASIC13.71□□□□□ -0.21
MT-ND1P03886 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.71□□□□□ -0.21
MT-ND1P03886 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.71□□□□□ -0.21
MT-ND1P03886 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.71□□□□□ -0.21
MT-ND1P03886 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MT-ND1P03886 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MT-ND1P03886 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.71□□□□□ -0.22
MT-ND1P03886 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MT-ND1P03886 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MT-ND1P03886 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
MT-ND1P03886 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MT-ND1P03886 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.71□□□□□ -0.22
MT-ND1P03886 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
MT-ND1P03886 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
MT-ND1P03886 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.71□□□□□ -0.22
MT-ND1P03886 SLC7A15P-201ENST00000424028 1363 ntBASIC13.71□□□□□ -0.22
MT-ND1P03886 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
MT-ND1P03886 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
MT-ND1P03886 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
MT-ND1P03886 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MT-ND1P03886 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.7□□□□□ -0.22
MT-ND1P03886 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms