Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HLA-DRAP01903 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.52■□□□□ 0.07
HLA-DRAP01903 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DRAP01903 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DRAP01903 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DRAP01903 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 KRT8P24-201ENST00000560290 1559 ntBASIC15.5■□□□□ 0.07
HLA-DRAP01903 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 RCC2P8-201ENST00000502779 1035 ntBASIC15.5■□□□□ 0.07
HLA-DRAP01903 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 AP001258.2-201ENST00000529891 490 ntBASIC15.5■□□□□ 0.07
HLA-DRAP01903 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 AC140658.4-201ENST00000561990 352 ntBASIC15.5■□□□□ 0.07
HLA-DRAP01903 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HLA-DRAP01903 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.5■□□□□ 0.07
HLA-DRAP01903 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DRAP01903 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms