Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.48■□□□□ 0.23
ATP2A1O14983 RN7SL665P-201ENST00000578793 300 ntBASIC16.48■□□□□ 0.23
ATP2A1O14983 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.48■□□□□ 0.23
ATP2A1O14983 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 AC005618.3-201ENST00000624928 458 ntBASIC16.48■□□□□ 0.23
ATP2A1O14983 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 TNRC18P2-201ENST00000417666 2714 ntBASIC16.48■□□□□ 0.23
ATP2A1O14983 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
ATP2A1O14983 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
ATP2A1O14983 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ATP2A1O14983 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
ATP2A1O14983 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
ATP2A1O14983 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A1O14983 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A1O14983 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
ATP2A1O14983 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ATP2A1O14983 GUSBP10-201ENST00000417412 665 ntBASIC16.47■□□□□ 0.23
ATP2A1O14983 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A1O14983 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A1O14983 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A1O14983 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A1O14983 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A1O14983 AP001065.2-201ENST00000617205 644 ntBASIC16.47■□□□□ 0.23
ATP2A1O14983 MIR6858-201ENST00000620733 67 ntBASIC16.47■□□□□ 0.23
ATP2A1O14983 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A1O14983 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A1O14983 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A1O14983 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC16.47■□□□□ 0.23
ATP2A1O14983 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.47■□□□□ 0.23
ATP2A1O14983 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
ATP2A1O14983 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
ATP2A1O14983 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ATP2A1O14983 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
ATP2A1O14983 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATP2A1O14983 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A1O14983 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ATP2A1O14983 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ATP2A1O14983 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 HIST2H2BA-201ENST00000412169 381 ntBASIC16.46■□□□□ 0.23
ATP2A1O14983 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.46■□□□□ 0.23
ATP2A1O14983 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ATP2A1O14983 LYPLA2P1-203ENST00000447689 696 ntBASIC16.46■□□□□ 0.23
ATP2A1O14983 AC018638.5-201ENST00000450885 754 ntBASIC16.46■□□□□ 0.23
ATP2A1O14983 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.46■□□□□ 0.23
ATP2A1O14983 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.46■□□□□ 0.23
ATP2A1O14983 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.46■□□□□ 0.23
ATP2A1O14983 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.46■□□□□ 0.23
ATP2A1O14983 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
ATP2A1O14983 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ATP2A1O14983 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
ATP2A1O14983 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATP2A1O14983 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ATP2A1O14983 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.46■□□□□ 0.23
ATP2A1O14983 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.46■□□□□ 0.23
ATP2A1O14983 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms