Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 RN7SL8P-201ENST00000461771 266 ntBASIC14.34□□□□□ -0.11
TLR4O00206 AC130709.1-201ENST00000484779 1212 ntBASIC14.34□□□□□ -0.11
TLR4O00206 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 AC135983.4-201ENST00000564116 1262 ntBASIC14.34□□□□□ -0.11
TLR4O00206 AC005632.3-201ENST00000605544 308 ntBASIC14.34□□□□□ -0.11
TLR4O00206 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TLR4O00206 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TLR4O00206 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.34□□□□□ -0.11
TLR4O00206 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TLR4O00206 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TLR4O00206 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TLR4O00206 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TLR4O00206 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TLR4O00206 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 MIR557-201ENST00000385239 98 ntBASIC14.33□□□□□ -0.12
TLR4O00206 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC14.33□□□□□ -0.12
TLR4O00206 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 AL807761.2-201ENST00000422849 729 ntBASIC14.33□□□□□ -0.12
TLR4O00206 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.33□□□□□ -0.12
TLR4O00206 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 DUX4L50-201ENST00000455245 715 ntBASIC14.33□□□□□ -0.12
TLR4O00206 RN7SL530P-201ENST00000485097 298 ntBASIC14.33□□□□□ -0.12
TLR4O00206 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.33□□□□□ -0.12
TLR4O00206 AC124068.2-201ENST00000569473 1109 ntBASIC14.33□□□□□ -0.12
TLR4O00206 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.33□□□□□ -0.12
TLR4O00206 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 YRDCP1-201ENST00000621419 643 ntBASIC14.33□□□□□ -0.12
TLR4O00206 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TLR4O00206 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.33□□□□□ -0.12
TLR4O00206 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.33□□□□□ -0.12
TLR4O00206 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TLR4O00206 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
TLR4O00206 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.32□□□□□ -0.12
TLR4O00206 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TLR4O00206 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.32□□□□□ -0.12
TLR4O00206 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.32□□□□□ -0.12
TLR4O00206 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TLR4O00206 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TLR4O00206 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TLR4O00206 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TLR4O00206 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.32□□□□□ -0.12
TLR4O00206 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.32□□□□□ -0.12
TLR4O00206 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TLR4O00206 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms