Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC140113.1-201ENST00000603467 169 ntBASIC12.57□□□□□ -0.4
MBD3L3A6NE82 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 AP001267.2-201ENST00000532619 2086 ntBASIC12.57□□□□□ -0.4
MBD3L3A6NE82 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
MBD3L3A6NE82 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 CELP-201ENST00000411440 1249 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 HMGA1P1-201ENST00000415560 1062 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 RN7SL788P-201ENST00000460504 316 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SLC25A15P3-201ENST00000505530 290 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 KLF17P1-201ENST00000547105 1126 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AC007952.4-201ENST00000573866 637 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 RN7SL455P-201ENST00000580629 282 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AC005041.3-201ENST00000606287 649 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AC105137.3-201ENST00000617588 984 ntBASIC12.56□□□□□ -0.4
MBD3L3A6NE82 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
MBD3L3A6NE82 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 INTS4P1-203ENST00000641008 3683 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 AC046158.3-201ENST00000624947 2558 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 MYO15B-237ENST00000642007 4893 ntBASIC12.55□□□□□ -0.4
MBD3L3A6NE82 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
MBD3L3A6NE82 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms