Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 ADK-205ENST00000539909 1866 ntTSL 2 BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
DDX49Q9Y6V7 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 AL133338.1-201ENST00000565695 1517 ntBASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 TMEM198B-204ENST00000484016 896 ntBASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
DDX49Q9Y6V7 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 KRT18P25-201ENST00000508931 1278 ntBASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 DUX4L45-201ENST00000566406 1057 ntBASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 CICP16-201ENST00000502609 2813 ntBASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
DDX49Q9Y6V7 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms