Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 PUDPP3-201ENST00000445368 636 ntBASIC13.64□□□□□ -0.23
IFT52Q9Y366 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 CRB3P1-201ENST00000449338 276 ntBASIC13.64□□□□□ -0.23
IFT52Q9Y366 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 AC106818.1-201ENST00000623223 3242 ntBASIC13.64□□□□□ -0.23
IFT52Q9Y366 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
IFT52Q9Y366 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
IFT52Q9Y366 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 SORD2P-201ENST00000558556 1069 ntBASIC13.63□□□□□ -0.23
IFT52Q9Y366 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
IFT52Q9Y366 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
IFT52Q9Y366 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms