Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 RN7SL564P-201ENST00000496309 250 ntBASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AL359091.4-201ENST00000610052 409 ntBASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 AC073911.3-201ENST00000624401 631 ntBASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SYNPO2Q9UMS6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 ODCP-201ENST00000459650 1639 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 RN7SKP109-201ENST00000410592 316 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 AC092573.1-201ENST00000433054 884 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 KRT8P2-201ENST00000556193 944 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 AC091769.1-201ENST00000619576 568 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 MIR6727-201ENST00000620702 65 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 BX640514.1-201ENST00000583223 1918 ntBASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SYNPO2Q9UMS6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SYNPO2Q9UMS6 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms