Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 SNX18-202ENST00000343017 3140 ntBASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 TBC1D27-202ENST00000424239 1573 ntBASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC19.1■□□□□ 0.65
NPC1L1Q9UHC9 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 API5-208ENST00000531273 1868 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 TPM1-223ENST00000560445 485 ntTSL 3 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 RN7SL190P-201ENST00000582519 257 ntBASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 HPX-213ENST00000615166 826 ntTSL 5 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 YRDCP1-201ENST00000621419 643 ntBASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NPC1L1Q9UHC9 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 CHCHD2P9-201ENST00000461726 456 ntBASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 POLD4-208ENST00000532830 904 ntTSL 3 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 AC084781.1-201ENST00000613737 656 ntBASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 AC103691.2-201ENST00000618824 433 ntBASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 GARS-210ENST00000627489 324 ntTSL 4 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NPC1L1Q9UHC9 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 AC006372.4-201ENST00000624122 1543 ntBASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 AC015909.5-201ENST00000624336 2266 ntBASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 AC025183.3-201ENST00000623526 1482 ntBASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 CROT-203ENST00000419147 2959 ntTSL 2 BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NPC1L1Q9UHC9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 AC019109.1-201ENST00000401725 1874 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 EEF1DP6-201ENST00000449232 372 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 IGLV3-15-201ENST00000518356 244 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 AP001184.1-201ENST00000637936 376 ntBASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 ABR-228ENST00000574437 3196 ntTSL 5 BASIC19.07■□□□□ 0.64
NPC1L1Q9UHC9 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms