Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 AC126335.2-201ENST00000623362 4637 ntBASIC12.21□□□□□ -0.45
RNF7Q9UBF6 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 NKAIN1P1-201ENST00000435754 582 ntBASIC12.21□□□□□ -0.45
RNF7Q9UBF6 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 AC091804.1-201ENST00000486888 567 ntBASIC12.21□□□□□ -0.45
RNF7Q9UBF6 PGAM1P5-201ENST00000548011 764 ntBASIC12.21□□□□□ -0.45
RNF7Q9UBF6 SNORD3B-2-202ENST00000571722 791 ntBASIC12.21□□□□□ -0.45
RNF7Q9UBF6 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RNF7Q9UBF6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 AC152010.1-201ENST00000415779 2006 ntBASIC12.21□□□□□ -0.46
RNF7Q9UBF6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 AC020910.6-201ENST00000623084 1459 ntBASIC12.21□□□□□ -0.46
RNF7Q9UBF6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RNF7Q9UBF6 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC078875.1-201ENST00000431907 724 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 XBP1P1-201ENST00000436573 652 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 EIF4HP1-201ENST00000453115 687 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 MARK2P5-201ENST00000507649 634 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC003686.1-201ENST00000550956 1034 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC140658.4-201ENST00000561990 352 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC020914.3-201ENST00000594712 304 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AL132994.2-201ENST00000603120 687 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC138649.2-201ENST00000615886 705 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 AC244452.3-201ENST00000636814 210 ntBASIC12.2□□□□□ -0.46
RNF7Q9UBF6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.2□□□□□ -0.46
RNF7Q9UBF6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms