Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
COL20A1Q9P218 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
COL20A1Q9P218 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 AC020910.6-201ENST00000623084 1459 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 AC006987.1-201ENST00000413610 527 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 BX679664.3-201ENST00000414070 555 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 ERP29P1-201ENST00000442902 706 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 AC113935.1-201ENST00000471722 555 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 SIGLEC22P-201ENST00000599104 714 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 MIR6727-201ENST00000620702 65 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COL20A1Q9P218 SHMT1P1-201ENST00000419974 1312 ntBASIC16.16■□□□□ 0.18
COL20A1Q9P218 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.16■□□□□ 0.18
COL20A1Q9P218 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PYY2-201ENST00000315776 282 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AC103592.1-201ENST00000394513 664 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 PPP1R2P4-201ENST00000424051 595 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AC079112.1-201ENST00000454972 939 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.15■□□□□ 0.18
COL20A1Q9P218 RNA5SP417-201ENST00000516459 108 ntBASIC16.15■□□□□ 0.18
COL20A1Q9P218 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COL20A1Q9P218 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms