Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CISHQ9NSE2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CISHQ9NSE2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CISHQ9NSE2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CISHQ9NSE2 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CISHQ9NSE2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CISHQ9NSE2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
CISHQ9NSE2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CISHQ9NSE2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CISHQ9NSE2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.39■□□□□ 0.05
CISHQ9NSE2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 GRK6P1-201ENST00000400595 1711 ntBASIC15.38■□□□□ 0.05
CISHQ9NSE2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 AC016700.1-201ENST00000429424 312 ntBASIC15.38■□□□□ 0.05
CISHQ9NSE2 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 AC125604.1-201ENST00000496255 707 ntBASIC15.38■□□□□ 0.05
CISHQ9NSE2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 AC138649.2-201ENST00000615886 705 ntBASIC15.38■□□□□ 0.05
CISHQ9NSE2 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CISHQ9NSE2 AC067750.1-201ENST00000608826 6545 ntBASIC15.38■□□□□ 0.05
CISHQ9NSE2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.38■□□□□ 0.05
CISHQ9NSE2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 MIR1247-201ENST00000408206 136 ntBASIC15.37■□□□□ 0.05
CISHQ9NSE2 EIF4HP1-201ENST00000453115 687 ntBASIC15.37■□□□□ 0.05
CISHQ9NSE2 KRT8P13-201ENST00000463294 1010 ntBASIC15.37■□□□□ 0.05
CISHQ9NSE2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 AC026740.1-201ENST00000607068 791 ntBASIC15.37■□□□□ 0.05
CISHQ9NSE2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.37■□□□□ 0.05
CISHQ9NSE2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CISHQ9NSE2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms